Protein–RNA interactions for Protein: Q9UBL6

CPNE7, Copine-7, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7Q9UBL6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 AC009947.1-201ENST00000444350 727 ntBASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 AL139327.4-201ENST00000612362 153 ntBASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 AC046185.3-201ENST00000623228 1824 ntBASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 LINC00304-203ENST00000565008 1864 ntBASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CPNE7Q9UBL6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 LINC00982-205ENST00000420957 435 ntBASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 MED15P5-201ENST00000423150 992 ntBASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 AC140113.2-201ENST00000604370 208 ntBASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 FAM197Y3-203ENST00000618346 717 ntBASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 AC023511.2-201ENST00000618803 211 ntBASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 PMS2P7-201ENST00000506558 1336 ntBASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CPNE7Q9UBL6 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 AL591424.1-201ENST00000442569 1213 ntBASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 AC108751.1-201ENST00000490852 363 ntBASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 AL353135.1-201ENST00000606729 504 ntBASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 AC011270.2-201ENST00000624293 2550 ntBASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC16.88■□□□□ 0.29
CPNE7Q9UBL6 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CPNE7Q9UBL6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms