Protein–RNA interactions for Protein: Q9UBB6

NCDN, Neurochondrin, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCDNQ9UBB6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 COX5BP2-201ENST00000392354 334 ntBASIC17.25■□□□□ 0.35
NCDNQ9UBB6 AC002056.1-201ENST00000395613 760 ntBASIC17.25■□□□□ 0.35
NCDNQ9UBB6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 FAM86C2P-203ENST00000528684 1004 ntBASIC17.25■□□□□ 0.35
NCDNQ9UBB6 SLC25A39P2-201ENST00000537614 270 ntBASIC17.25■□□□□ 0.35
NCDNQ9UBB6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
NCDNQ9UBB6 AC092919.2-201ENST00000623631 1645 ntBASIC17.25■□□□□ 0.35
NCDNQ9UBB6 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 AC069335.1-201ENST00000489972 472 ntBASIC17.24■□□□□ 0.35
NCDNQ9UBB6 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 AL049812.1-201ENST00000432563 2267 ntBASIC17.24■□□□□ 0.35
NCDNQ9UBB6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NCDNQ9UBB6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.23■□□□□ 0.35
NCDNQ9UBB6 AL592309.1-201ENST00000443127 649 ntBASIC17.23■□□□□ 0.35
NCDNQ9UBB6 CRB3P1-201ENST00000449338 276 ntBASIC17.23■□□□□ 0.35
NCDNQ9UBB6 AL513480.1-201ENST00000451731 511 ntBASIC17.23■□□□□ 0.35
NCDNQ9UBB6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.23■□□□□ 0.35
NCDNQ9UBB6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.22■□□□□ 0.35
NCDNQ9UBB6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 PI4KAP1-204ENST00000612579 1703 ntBASIC17.22■□□□□ 0.35
NCDNQ9UBB6 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NCDNQ9UBB6 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 188.1 ms