Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 AC079328.2-201ENST00000561241 3354 ntBASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CTPS2Q9NRF8 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 AC010331.1-201ENST00000611423 582 ntBASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CTPS2Q9NRF8 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 MIR1224-201ENST00000408193 85 ntBASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 AC068472.1-201ENST00000474589 881 ntBASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CTPS2Q9NRF8 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms