Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 FGFR3P6-201ENST00000457012 610 ntBASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 SCARNA2-201ENST00000458748 420 ntBASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 AKR1B10P2-201ENST00000577332 927 ntBASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 AL031008.1-201ENST00000619963 541 ntBASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.49■□□□□ 0.23
PRDM9Q9NQV7 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 AC012313.1-201ENST00000593393 3059 ntBASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 AC079781.3-201ENST00000449110 356 ntBASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 MTND2P7-201ENST00000521337 640 ntBASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PRDM9Q9NQV7 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AC009336.1-201ENST00000608941 1553 ntBASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AL356309.3-201ENST00000624132 1934 ntBASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AL160237.2-201ENST00000556165 472 ntBASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AL139288.1-201ENST00000623748 933 ntBASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AC073592.4-201ENST00000623827 446 ntBASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 AC046185.3-201ENST00000623228 1824 ntBASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PRDM9Q9NQV7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PRDM9Q9NQV7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms