Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 AC093677.2-201ENST00000600169 1863 ntBASIC18.96■□□□□ 0.63
HIPK3Q9H422 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.96■□□□□ 0.63
HIPK3Q9H422 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
HIPK3Q9H422 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 KLK8-202ENST00000320838 456 ntTSL 5 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 AC099522.2-201ENST00000607001 744 ntBASIC18.95■□□□□ 0.62
HIPK3Q9H422 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 AF228730.6-201ENST00000641497 218 ntBASIC18.95■□□□□ 0.62
HIPK3Q9H422 AC084121.3-201ENST00000641716 218 ntBASIC18.95■□□□□ 0.62
HIPK3Q9H422 AC105233.6-201ENST00000642093 218 ntBASIC18.95■□□□□ 0.62
HIPK3Q9H422 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
HIPK3Q9H422 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.95■□□□□ 0.62
HIPK3Q9H422 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 CYP51A1P2-201ENST00000419457 1499 ntBASIC18.94■□□□□ 0.62
HIPK3Q9H422 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
HIPK3Q9H422 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.94■□□□□ 0.62
HIPK3Q9H422 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 AC015922.1-201ENST00000421102 1152 ntBASIC18.93■□□□□ 0.62
HIPK3Q9H422 AC005034.1-201ENST00000426657 489 ntBASIC18.93■□□□□ 0.62
HIPK3Q9H422 BASP1P1-201ENST00000430708 665 ntBASIC18.93■□□□□ 0.62
HIPK3Q9H422 AL592309.1-201ENST00000443127 649 ntBASIC18.93■□□□□ 0.62
HIPK3Q9H422 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 AL035252.4-201ENST00000624174 288 ntBASIC18.93■□□□□ 0.62
HIPK3Q9H422 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.93■□□□□ 0.62
HIPK3Q9H422 AC129492.6-201ENST00000611383 1305 ntBASIC18.93■□□□□ 0.62
HIPK3Q9H422 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
HIPK3Q9H422 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms