Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 ZNF444P1-201ENST00000559497 298 ntBASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 AL118508.1-201ENST00000613502 2345 ntBASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CHRDL1Q9BU40 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 SPEG-225ENST00000617028 815 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 HYMAI.1-201ENST00000620949 238 ntBASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 DFFB-212ENST00000625756 649 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
CHRDL1Q9BU40 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CHRDL1Q9BU40 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC13.9□□□□□ -0.19
CHRDL1Q9BU40 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 NKILA-202ENST00000614771 2598 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 AC007326.2-201ENST00000624224 7579 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 MIR662-201ENST00000384847 95 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 TMPOP1-202ENST00000424642 1267 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 KRT18P65-201ENST00000439811 1286 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 AP003733.1-201ENST00000491725 852 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 AC063952.2-201ENST00000498792 1227 ntBASIC13.89□□□□□ -0.19
CHRDL1Q9BU40 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms