Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 PON3-205ENST00000451904 1053 ntTSL 3 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 IGHV3-52-201ENST00000519770 353 ntBASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 AL390719.2-201ENST00000606993 987 ntBASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC010460.3-201ENST00000511359 1579 ntBASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
SHANK2-AS3Q9BTD1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC105020.1-201ENST00000435356 2205 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 HBZP1-201ENST00000354915 429 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 SAPCD2P2-201ENST00000431719 1174 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AL137013.1-201ENST00000432946 1228 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 HOMER2P1-201ENST00000455653 964 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC093827.2-201ENST00000512654 315 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC005363.2-201ENST00000618631 242 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
SHANK2-AS3Q9BTD1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC005915.1-201ENST00000624912 2018 ntBASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC117947.1-201ENST00000427448 529 ntBASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC13.42□□□□□ -0.26
SHANK2-AS3Q9BTD1 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms