Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 SPCS2P4-201ENST00000436160 681 ntBASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 TP53TG3HP-202ENST00000569755 579 ntBASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.72□□□□□ -0.05
CSMD1Q96PZ7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 AC092658.1-201ENST00000505836 891 ntBASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 PI4KAP1-204ENST00000612579 1703 ntBASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.71□□□□□ -0.05
CSMD1Q96PZ7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD1Q96PZ7 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD1Q96PZ7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
CSMD1Q96PZ7 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC112191.1-201ENST00000523689 701 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC106886.1-201ENST00000568660 600 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC009118.2-201ENST00000613275 655 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AL133373.2-201ENST00000623187 2828 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 MIR4538-201ENST00000581377 78 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC084121.4-201ENST00000641598 221 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AF228730.8-201ENST00000642140 221 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 GID4-202ENST00000376345 1391 ntTSL 3 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC079140.1-201ENST00000508039 487 ntBASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CSMD1Q96PZ7 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AC005332.8-201ENST00000622750 2735 ntBASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 SPDYE7P-202ENST00000420373 878 ntBASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CSMD1Q96PZ7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms