Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 ATP5G2P1-201ENST00000433580 426 ntBASIC16.51■□□□□ 0.23
COL21A1Q96P44 AP002383.4-201ENST00000442518 975 ntBASIC16.51■□□□□ 0.23
COL21A1Q96P44 VENTXP7-201ENST00000475503 772 ntBASIC16.51■□□□□ 0.23
COL21A1Q96P44 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 AP002414.4-201ENST00000589764 1148 ntBASIC16.51■□□□□ 0.23
COL21A1Q96P44 NPAP1P7-201ENST00000613027 823 ntBASIC16.51■□□□□ 0.23
COL21A1Q96P44 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
COL21A1Q96P44 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
COL21A1Q96P44 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 DRAXINP1-201ENST00000437611 948 ntBASIC16.5■□□□□ 0.23
COL21A1Q96P44 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
COL21A1Q96P44 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.5■□□□□ 0.23
COL21A1Q96P44 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 AC092119.3-201ENST00000612618 583 ntBASIC16.49■□□□□ 0.23
COL21A1Q96P44 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
COL21A1Q96P44 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL21A1Q96P44 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL21A1Q96P44 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms