Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.79■□□□□ 0.6
LRCH3Q96II8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH3Q96II8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.79■□□□□ 0.6
LRCH3Q96II8 FP475955.4-201ENST00000623131 1990 ntBASIC18.79■□□□□ 0.6
LRCH3Q96II8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRCH3Q96II8 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH3Q96II8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH3Q96II8 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH3Q96II8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH3Q96II8 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 AL513480.1-201ENST00000451731 511 ntBASIC18.78■□□□□ 0.6
LRCH3Q96II8 AC243562.1-201ENST00000560672 389 ntBASIC18.78■□□□□ 0.6
LRCH3Q96II8 AC026150.2-201ENST00000564693 1156 ntBASIC18.78■□□□□ 0.6
LRCH3Q96II8 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH3Q96II8 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRCH3Q96II8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 SIRPAP1-201ENST00000448467 1770 ntBASIC18.78■□□□□ 0.6
LRCH3Q96II8 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.78■□□□□ 0.6
LRCH3Q96II8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.6
LRCH3Q96II8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 AC079776.1-201ENST00000401540 1152 ntBASIC18.77■□□□□ 0.6
LRCH3Q96II8 AC096633.1-201ENST00000422446 749 ntBASIC18.77■□□□□ 0.6
LRCH3Q96II8 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.77■□□□□ 0.6
LRCH3Q96II8 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.77■□□□□ 0.6
LRCH3Q96II8 MIR6805-201ENST00000615055 62 ntBASIC18.77■□□□□ 0.6
LRCH3Q96II8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
LRCH3Q96II8 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH3Q96II8 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH3Q96II8 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
LRCH3Q96II8 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH3Q96II8 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH3Q96II8 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH3Q96II8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH3Q96II8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
LRCH3Q96II8 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 SPDYE14P-201ENST00000442619 822 ntBASIC18.76■□□□□ 0.59
LRCH3Q96II8 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 IGHV3-72-202ENST00000621503 303 ntBASIC18.76■□□□□ 0.59
LRCH3Q96II8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.76■□□□□ 0.59
LRCH3Q96II8 AC120498.9-201ENST00000339021 3867 ntBASIC18.75■□□□□ 0.59
LRCH3Q96II8 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
LRCH3Q96II8 NME6-203ENST00000415644 849 ntTSL 2 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC18.75■□□□□ 0.59
LRCH3Q96II8 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms