Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 AC125634.1-201ENST00000438758 1403 ntBASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.2■□□□□ 0.5
TRAF3IP1Q8TDR0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 MYCLP1-201ENST00000372451 1075 ntBASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 FAM86EP-206ENST00000510506 987 ntBASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 AC016396.2-201ENST00000562575 1417 ntBASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 AL353801.3-201ENST00000609898 542 ntBASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRAF3IP1Q8TDR0 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 AC246785.2-201ENST00000432512 513 ntBASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TRAF3IP1Q8TDR0 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 AP001094.4-201ENST00000579008 2176 ntBASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAF3IP1Q8TDR0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms