Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RAB3IL1Q8TBN0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 AC046158.3-201ENST00000624947 2558 ntBASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.42■□□□□ 0.38
RAB3IL1Q8TBN0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 MIR3917-201ENST00000580971 93 ntBASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 AC010653.2-201ENST00000623505 997 ntBASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 AC116562.4-202ENST00000641738 218 ntBASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
RAB3IL1Q8TBN0 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 AC007663.1-201ENST00000438948 1240 ntBASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 LINC02012-201ENST00000608206 1725 ntBASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 AL603756.1-201ENST00000606511 2163 ntBASIC17.4■□□□□ 0.38
RAB3IL1Q8TBN0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms