Protein–RNA interactions for Protein: Q8ND90

PNMA1, Paraneoplastic antigen Ma1, humanhuman

Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA1Q8ND90 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.25■□□□□ 0.83
PNMA1Q8ND90 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AL022342.1-201ENST00000400363 863 ntBASIC20.24■□□□□ 0.83
PNMA1Q8ND90 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AC136632.2-201ENST00000512891 861 ntBASIC20.24■□□□□ 0.83
PNMA1Q8ND90 SLC25A1P1-201ENST00000528351 927 ntBASIC20.24■□□□□ 0.83
PNMA1Q8ND90 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 AC117500.6-201ENST00000624871 588 ntBASIC20.24■□□□□ 0.83
PNMA1Q8ND90 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.24■□□□□ 0.83
PNMA1Q8ND90 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 HCG11-201ENST00000411553 5696 ntBASIC20.23■□□□□ 0.83
PNMA1Q8ND90 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 MIR1199-201ENST00000621445 119 ntBASIC20.23■□□□□ 0.83
PNMA1Q8ND90 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PNMA1Q8ND90 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.22■□□□□ 0.83
PNMA1Q8ND90 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PNMA1Q8ND90 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms