Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 DUX4L17-201ENST00000557360 1267 ntBASIC13.63□□□□□ -0.23
C3orf56Q8N813 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC13.63□□□□□ -0.23
C3orf56Q8N813 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
C3orf56Q8N813 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AC148477.5-201ENST00000625164 1645 ntBASIC13.62□□□□□ -0.23
C3orf56Q8N813 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 GSAP-205ENST00000430584 600 ntTSL 5 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AC002472.2-201ENST00000442739 958 ntBASIC13.62□□□□□ -0.23
C3orf56Q8N813 GAPDHP21-201ENST00000450301 1010 ntBASIC13.62□□□□□ -0.23
C3orf56Q8N813 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 CXCL1P1-201ENST00000502804 216 ntBASIC13.62□□□□□ -0.23
C3orf56Q8N813 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 VPS29-207ENST00000549970 818 ntTSL 3 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 RIN3-211ENST00000557762 517 ntTSL 3 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 AC027307.3-201ENST00000594262 1100 ntBASIC13.62□□□□□ -0.23
C3orf56Q8N813 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
C3orf56Q8N813 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
C3orf56Q8N813 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AL032819.2-201ENST00000624543 2162 ntBASIC13.61□□□□□ -0.23
C3orf56Q8N813 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 MIR943-201ENST00000401286 94 ntBASIC13.61□□□□□ -0.23
C3orf56Q8N813 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AC055876.3-201ENST00000431496 288 ntBASIC13.61□□□□□ -0.23
C3orf56Q8N813 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AC015911.4-201ENST00000588022 1070 ntBASIC13.61□□□□□ -0.23
C3orf56Q8N813 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AC138649.4-201ENST00000612222 287 ntBASIC13.61□□□□□ -0.23
C3orf56Q8N813 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
C3orf56Q8N813 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
C3orf56Q8N813 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms