Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 AL020989.1-201ENST00000422979 469 ntBASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCUBE3Q8IX30 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 AL356309.3-201ENST00000624132 1934 ntBASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 SIGLEC16-201ENST00000599858 1437 ntBASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SCUBE3Q8IX30 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 BX005266.1-201ENST00000473402 457 ntBASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 AC073592.4-201ENST00000623827 446 ntBASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
SCUBE3Q8IX30 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 SART3-203ENST00000546611 1184 ntBASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
SCUBE3Q8IX30 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AL645608.8-201ENST00000606034 2086 ntBASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AC079781.3-201ENST00000449110 356 ntBASIC18.31■□□□□ 0.52
SCUBE3Q8IX30 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms