Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 RNF152P1-201ENST00000397754 604 ntBASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 TSPY5P-201ENST00000426936 936 ntBASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AC112907.2-201ENST00000448639 330 ntBASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 KRT18P38-201ENST00000449496 1282 ntBASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AC092647.4-201ENST00000457211 535 ntBASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AC073508.3-201ENST00000619697 1419 ntBASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC50Q8IVM0 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC50Q8IVM0 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC18.46■□□□□ 0.54
CCDC50Q8IVM0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
CCDC50Q8IVM0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 AK4P3-201ENST00000418260 669 ntBASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 HOMER2P1-201ENST00000455653 964 ntBASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC50Q8IVM0 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 HBZP1-201ENST00000354915 429 ntBASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 MIR662-201ENST00000384847 95 ntBASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 MTCL1P1-201ENST00000446207 792 ntBASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 VENTXP5-201ENST00000523979 775 ntBASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC50Q8IVM0 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC50Q8IVM0 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
CCDC50Q8IVM0 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
CCDC50Q8IVM0 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
CCDC50Q8IVM0 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.43■□□□□ 0.54
CCDC50Q8IVM0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms