Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 PRSS29P-201ENST00000440800 595 ntBASIC18.49■□□□□ 0.55
RNF135Q8IUD6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 GPR89P-201ENST00000407924 1495 ntBASIC18.49■□□□□ 0.55
RNF135Q8IUD6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.49■□□□□ 0.55
RNF135Q8IUD6 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 AL139400.1-201ENST00000366220 510 ntBASIC18.48■□□□□ 0.55
RNF135Q8IUD6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.48■□□□□ 0.55
RNF135Q8IUD6 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 AL031432.2-201ENST00000566714 459 ntBASIC18.48■□□□□ 0.55
RNF135Q8IUD6 AL928711.1-201ENST00000570165 459 ntBASIC18.48■□□□□ 0.55
RNF135Q8IUD6 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF135Q8IUD6 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 LINC00602-201ENST00000629776 2065 ntBASIC18.47■□□□□ 0.55
RNF135Q8IUD6 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 RNF34-208ENST00000555076 593 ntTSL 3 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 AC004449.1-201ENST00000564240 433 ntBASIC18.47■□□□□ 0.55
RNF135Q8IUD6 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF135Q8IUD6 AC026471.1-201ENST00000564629 3026 ntBASIC18.47■□□□□ 0.55
RNF135Q8IUD6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms