Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 AC112482.1-201ENST00000492080 688 ntBASIC19.42■□□□□ 0.7
TRIM50Q86XT4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TRIM50Q86XT4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 MYCLP1-201ENST00000372451 1075 ntBASIC19.41■□□□□ 0.7
TRIM50Q86XT4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 VN2R19P-201ENST00000442399 1052 ntBASIC19.41■□□□□ 0.7
TRIM50Q86XT4 AC092183.1-201ENST00000469884 875 ntBASIC19.41■□□□□ 0.7
TRIM50Q86XT4 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 AC092865.6-201ENST00000642101 219 ntBASIC19.41■□□□□ 0.7
TRIM50Q86XT4 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TRIM50Q86XT4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 CRYGEP-201ENST00000412192 528 ntBASIC19.4■□□□□ 0.7
TRIM50Q86XT4 IGLL3P-201ENST00000412472 434 ntBASIC19.4■□□□□ 0.7
TRIM50Q86XT4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 HCG4B-203ENST00000450128 991 ntBASIC19.4■□□□□ 0.7
TRIM50Q86XT4 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 GPR89P-201ENST00000407924 1495 ntBASIC19.4■□□□□ 0.7
TRIM50Q86XT4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TRIM50Q86XT4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM50Q86XT4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.39■□□□□ 0.7
TRIM50Q86XT4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM50Q86XT4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM50Q86XT4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TRIM50Q86XT4 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TRIM50Q86XT4 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms