Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TUBA1AQ71U36 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 AC112907.2-201ENST00000448639 330 ntBASIC16.15■□□□□ 0.18
TUBA1AQ71U36 HOMER2P1-201ENST00000455653 964 ntBASIC16.15■□□□□ 0.18
TUBA1AQ71U36 RASA4DP-201ENST00000460726 1199 ntBASIC16.15■□□□□ 0.18
TUBA1AQ71U36 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 AC087388.1-201ENST00000571370 1112 ntBASIC16.15■□□□□ 0.18
TUBA1AQ71U36 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 FLJ38576-201ENST00000623820 2459 ntBASIC16.15■□□□□ 0.18
TUBA1AQ71U36 AL590326.2-201ENST00000625139 305 ntBASIC16.15■□□□□ 0.18
TUBA1AQ71U36 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.15■□□□□ 0.18
TUBA1AQ71U36 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.18
TUBA1AQ71U36 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 KRT8P7-201ENST00000533003 1432 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 ARMC10P1-201ENST00000313754 855 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 FAM8A6P-201ENST00000407496 1135 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 AC092597.1-201ENST00000487352 616 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 AC034232.1-201ENST00000506026 1064 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 LINC01238-205ENST00000567549 1107 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 MIR3917-201ENST00000580971 93 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 TCAF2P1-201ENST00000291129 2421 ntBASIC16.14■□□□□ 0.17
TUBA1AQ71U36 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TUBA1AQ71U36 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.13■□□□□ 0.17
TUBA1AQ71U36 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms