Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 AC068880.1-201ENST00000507289 2297 ntBASIC17.45■□□□□ 0.38
BRAT1Q6PJG6 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAT1Q6PJG6 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
BRAT1Q6PJG6 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
BRAT1Q6PJG6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 AC136632.2-201ENST00000512891 861 ntBASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 AC120114.3-201ENST00000611923 658 ntBASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 IL9RP2-201ENST00000423948 1312 ntBASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
BRAT1Q6PJG6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 AC092910.1-201ENST00000482027 1129 ntBASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 AL356488.2-201ENST00000602755 427 ntBASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 AL353135.1-201ENST00000606729 504 ntBASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 AL138688.1-201ENST00000624851 1594 ntBASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
BRAT1Q6PJG6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 AC073621.1-201ENST00000392730 636 ntBASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
BRAT1Q6PJG6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.41■□□□□ 0.38
BRAT1Q6PJG6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms