Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 AD001527.2-201ENST00000622994 785 ntBASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
RFWD3Q6PCD5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 AC103564.2-201ENST00000432853 1299 ntBASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 PMPCAP1-201ENST00000508114 1576 ntBASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 AL049757.1-201ENST00000616842 1596 ntBASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 AC141586.5-201ENST00000624546 2050 ntBASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 AL139384.1-201ENST00000612143 3047 ntBASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RFWD3Q6PCD5 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AL356309.3-201ENST00000624132 1934 ntBASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AC090340.1-201ENST00000620778 4980 ntBASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AC079776.4-201ENST00000511039 504 ntBASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AC109462.3-201ENST00000573934 613 ntBASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AC004817.3-201ENST00000602957 2129 ntBASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 AC019129.2-201ENST00000609837 1235 ntBASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.18■□□□□ 0.5
RFWD3Q6PCD5 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFWD3Q6PCD5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms