Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 AL356309.3-201ENST00000624132 1934 ntBASIC18.11■□□□□ 0.49
TRNP1Q6NT89 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.11■□□□□ 0.49
TRNP1Q6NT89 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 AC097637.2-201ENST00000624096 1997 ntBASIC18.1■□□□□ 0.49
TRNP1Q6NT89 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 LINC02012-201ENST00000608206 1725 ntBASIC18.1■□□□□ 0.49
TRNP1Q6NT89 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 AC079781.3-201ENST00000449110 356 ntBASIC18.1■□□□□ 0.49
TRNP1Q6NT89 PRYP5-201ENST00000451909 266 ntBASIC18.1■□□□□ 0.49
TRNP1Q6NT89 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 AC064862.7-201ENST00000604520 867 ntBASIC18.1■□□□□ 0.49
TRNP1Q6NT89 AL139288.1-201ENST00000623748 933 ntBASIC18.1■□□□□ 0.49
TRNP1Q6NT89 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRNP1Q6NT89 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 AL450487.1-201ENST00000426799 995 ntBASIC18.09■□□□□ 0.49
TRNP1Q6NT89 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 RN7SL510P-201ENST00000581311 263 ntBASIC18.09■□□□□ 0.49
TRNP1Q6NT89 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 AC025062.2-201ENST00000605477 670 ntBASIC18.09■□□□□ 0.49
TRNP1Q6NT89 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 PCDHA12-202ENST00000613593 2588 ntBASIC18.09■□□□□ 0.49
TRNP1Q6NT89 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRNP1Q6NT89 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.08■□□□□ 0.49
TRNP1Q6NT89 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
TRNP1Q6NT89 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
TRNP1Q6NT89 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 LINC00982-205ENST00000420957 435 ntBASIC18.08■□□□□ 0.48
TRNP1Q6NT89 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
TRNP1Q6NT89 KRT126P-201ENST00000549467 1181 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms