Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
KHDC1Q4VXA5 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 NSUN5P1-202ENST00000421140 1535 ntBASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 NSUN5P2-203ENST00000457352 1529 ntBASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 AC012615.1-201ENST00000565797 1299 ntBASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
KHDC1Q4VXA5 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 Z69720.1-201ENST00000601483 472 ntBASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.68■□□□□ 0.42
KHDC1Q4VXA5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 DUSP5P1-201ENST00000441325 1139 ntBASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 AC104819.1-201ENST00000504587 486 ntBASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 MIR3652-201ENST00000579335 131 ntBASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 AL138831.2-201ENST00000606564 490 ntBASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.67■□□□□ 0.42
KHDC1Q4VXA5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms