Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAE1P78406 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
RAE1P78406 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 PMPCAP1-201ENST00000508114 1576 ntBASIC16.53■□□□□ 0.24
RAE1P78406 AC003669.1-201ENST00000334569 611 ntBASIC16.53■□□□□ 0.24
RAE1P78406 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
RAE1P78406 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.53■□□□□ 0.24
RAE1P78406 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAE1P78406 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.53■□□□□ 0.24
RAE1P78406 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RAE1P78406 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
RAE1P78406 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.53■□□□□ 0.24
RAE1P78406 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
RAE1P78406 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 ARMC10P1-201ENST00000313754 855 ntBASIC16.52■□□□□ 0.24
RAE1P78406 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.52■□□□□ 0.24
RAE1P78406 KLF4P1-201ENST00000412782 1185 ntBASIC16.52■□□□□ 0.24
RAE1P78406 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.52■□□□□ 0.24
RAE1P78406 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.52■□□□□ 0.24
RAE1P78406 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC16.52■□□□□ 0.24
RAE1P78406 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.52■□□□□ 0.24
RAE1P78406 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
RAE1P78406 AC092329.2-201ENST00000598402 547 ntBASIC16.52■□□□□ 0.24
RAE1P78406 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.52■□□□□ 0.24
RAE1P78406 AC091076.1-201ENST00000610741 619 ntBASIC16.52■□□□□ 0.24
RAE1P78406 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.52■□□□□ 0.24
RAE1P78406 AC114341.1-201ENST00000618070 349 ntBASIC16.52■□□□□ 0.24
RAE1P78406 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RAE1P78406 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC16.52■□□□□ 0.23
RAE1P78406 HTR7P1-202ENST00000624664 4411 ntBASIC16.52■□□□□ 0.23
RAE1P78406 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RAE1P78406 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAE1P78406 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC16.52■□□□□ 0.23
RAE1P78406 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAE1P78406 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RAE1P78406 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.52■□□□□ 0.23
RAE1P78406 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
RAE1P78406 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
RAE1P78406 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
RAE1P78406 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.51■□□□□ 0.23
RAE1P78406 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RAE1P78406 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
RAE1P78406 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms