Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17■□□□□ 0.31
YBX1P67809 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17■□□□□ 0.31
YBX1P67809 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17■□□□□ 0.31
YBX1P67809 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 FAM220CP-201ENST00000395253 831 ntBASIC17■□□□□ 0.31
YBX1P67809 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17■□□□□ 0.31
YBX1P67809 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17■□□□□ 0.31
YBX1P67809 AC091304.2-201ENST00000564639 760 ntBASIC17■□□□□ 0.31
YBX1P67809 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
YBX1P67809 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17■□□□□ 0.31
YBX1P67809 AL591684.3-201ENST00000605187 298 ntBASIC17■□□□□ 0.31
YBX1P67809 IFNL4P1-201ENST00000607083 540 ntBASIC17■□□□□ 0.31
YBX1P67809 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17■□□□□ 0.31
YBX1P67809 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
YBX1P67809 AL049757.1-201ENST00000616842 1596 ntBASIC17■□□□□ 0.31
YBX1P67809 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17■□□□□ 0.31
YBX1P67809 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
YBX1P67809 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
YBX1P67809 BX276092.7-203ENST00000637198 1536 ntBASIC17■□□□□ 0.31
YBX1P67809 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17■□□□□ 0.31
YBX1P67809 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17■□□□□ 0.31
YBX1P67809 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17■□□□□ 0.31
YBX1P67809 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17■□□□□ 0.31
YBX1P67809 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 KRT8P10-201ENST00000450021 1447 ntBASIC16.99■□□□□ 0.31
YBX1P67809 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 AKR1C7P-201ENST00000305623 895 ntBASIC16.99■□□□□ 0.31
YBX1P67809 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.99■□□□□ 0.31
YBX1P67809 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 KRT16P4-201ENST00000453883 522 ntBASIC16.99■□□□□ 0.31
YBX1P67809 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC16.99■□□□□ 0.31
YBX1P67809 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.99■□□□□ 0.31
YBX1P67809 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.99■□□□□ 0.31
YBX1P67809 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.99■□□□□ 0.31
YBX1P67809 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.99■□□□□ 0.31
YBX1P67809 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.99■□□□□ 0.31
YBX1P67809 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.99■□□□□ 0.31
YBX1P67809 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
YBX1P67809 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
YBX1P67809 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.98■□□□□ 0.31
YBX1P67809 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.98■□□□□ 0.31
YBX1P67809 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.98■□□□□ 0.31
YBX1P67809 KRT126P-201ENST00000549467 1181 ntBASIC16.98■□□□□ 0.31
YBX1P67809 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.98■□□□□ 0.31
YBX1P67809 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.98■□□□□ 0.31
YBX1P67809 AP001269.4-201ENST00000609611 512 ntBASIC16.98■□□□□ 0.31
YBX1P67809 AL121772.3-201ENST00000610840 674 ntBASIC16.98■□□□□ 0.31
YBX1P67809 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
YBX1P67809 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
YBX1P67809 AL118508.1-201ENST00000613502 2345 ntBASIC16.98■□□□□ 0.31
YBX1P67809 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms