Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 FAM197Y4-202ENST00000622692 608 ntBASIC12.37□□□□□ -0.43
RPL39P62891 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC12.37□□□□□ -0.43
RPL39P62891 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 KRT8P47-201ENST00000604727 1398 ntBASIC12.37□□□□□ -0.43
RPL39P62891 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC12.37□□□□□ -0.43
RPL39P62891 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
RPL39P62891 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC12.37□□□□□ -0.43
RPL39P62891 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
RPL39P62891 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RPL39P62891 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 PCDHB17P-201ENST00000539533 2393 ntBASIC12.36□□□□□ -0.43
RPL39P62891 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC12.36□□□□□ -0.43
RPL39P62891 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC12.36□□□□□ -0.43
RPL39P62891 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
RPL39P62891 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RPL39P62891 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC12.36□□□□□ -0.43
RPL39P62891 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC12.36□□□□□ -0.43
RPL39P62891 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC12.36□□□□□ -0.43
RPL39P62891 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC12.36□□□□□ -0.43
RPL39P62891 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC12.36□□□□□ -0.43
RPL39P62891 AL353719.1-201ENST00000566847 864 ntBASIC12.36□□□□□ -0.43
RPL39P62891 GRAP-204ENST00000573099 846 ntTSL 3 BASIC12.36□□□□□ -0.43
RPL39P62891 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC12.36□□□□□ -0.43
RPL39P62891 GRAMD4P8-201ENST00000605465 1115 ntBASIC12.36□□□□□ -0.43
RPL39P62891 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC12.36□□□□□ -0.43
RPL39P62891 AL023803.3-201ENST00000615559 522 ntBASIC12.36□□□□□ -0.43
RPL39P62891 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC12.36□□□□□ -0.43
RPL39P62891 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC12.36□□□□□ -0.43
RPL39P62891 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
RPL39P62891 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
RPL39P62891 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.36□□□□□ -0.43
RPL39P62891 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
RPL39P62891 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
RPL39P62891 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC12.35□□□□□ -0.43
RPL39P62891 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
RPL39P62891 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
RPL39P62891 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms