Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
AP1S2P56377 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.98■□□□□ 0.31
AP1S2P56377 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.98■□□□□ 0.31
AP1S2P56377 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.98■□□□□ 0.31
AP1S2P56377 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.98■□□□□ 0.31
AP1S2P56377 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC16.98■□□□□ 0.31
AP1S2P56377 KRT16P4-201ENST00000453883 522 ntBASIC16.98■□□□□ 0.31
AP1S2P56377 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.98■□□□□ 0.31
AP1S2P56377 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.98■□□□□ 0.31
AP1S2P56377 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.98■□□□□ 0.31
AP1S2P56377 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.98■□□□□ 0.31
AP1S2P56377 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.98■□□□□ 0.31
AP1S2P56377 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.98■□□□□ 0.31
AP1S2P56377 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP1S2P56377 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
AP1S2P56377 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP1S2P56377 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC16.97■□□□□ 0.31
AP1S2P56377 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
AP1S2P56377 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 FZD10-202ENST00000539839 3282 ntBASIC16.97■□□□□ 0.31
AP1S2P56377 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.97■□□□□ 0.31
AP1S2P56377 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.97■□□□□ 0.31
AP1S2P56377 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 NUS1P2-201ENST00000417358 873 ntBASIC16.97■□□□□ 0.31
AP1S2P56377 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.97■□□□□ 0.31
AP1S2P56377 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.97■□□□□ 0.31
AP1S2P56377 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 MIR5100-201ENST00000579544 119 ntBASIC16.97■□□□□ 0.31
AP1S2P56377 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.97■□□□□ 0.31
AP1S2P56377 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.97■□□□□ 0.31
AP1S2P56377 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 AP000867.4-201ENST00000641616 219 ntBASIC16.97■□□□□ 0.31
AP1S2P56377 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP1S2P56377 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
AP1S2P56377 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP1S2P56377 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.97■□□□□ 0.31
AP1S2P56377 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP1S2P56377 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
AP1S2P56377 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
AP1S2P56377 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP1S2P56377 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
AP1S2P56377 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 HCG4P8-203ENST00000443049 980 ntBASIC16.96■□□□□ 0.31
AP1S2P56377 NUS1P1-201ENST00000446295 882 ntBASIC16.96■□□□□ 0.31
AP1S2P56377 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.96■□□□□ 0.31
AP1S2P56377 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.96■□□□□ 0.31
AP1S2P56377 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.96■□□□□ 0.31
AP1S2P56377 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.96■□□□□ 0.31
AP1S2P56377 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP1S2P56377 AP001094.4-201ENST00000579008 2176 ntBASIC16.96■□□□□ 0.31
AP1S2P56377 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP1S2P56377 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP1S2P56377 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
AP1S2P56377 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms