Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 AL357033.4-201ENST00000617703 1807 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.84■□□□□ 0.45
ATXN3P54252 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 UPF3AP3-201ENST00000420996 769 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 AC092910.1-201ENST00000482027 1129 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 AC113404.2-201ENST00000507884 177 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.84■□□□□ 0.45
ATXN3P54252 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 AC140113.2-201ENST00000604370 208 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 AP001269.4-201ENST00000609611 512 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
ATXN3P54252 GNAS-203ENST00000306120 1878 ntBASIC17.84■□□□□ 0.45
ATXN3P54252 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATXN3P54252 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.84■□□□□ 0.45
ATXN3P54252 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATXN3P54252 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATXN3P54252 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
ATXN3P54252 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.83■□□□□ 0.45
ATXN3P54252 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.83■□□□□ 0.45
ATXN3P54252 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
ATXN3P54252 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.83■□□□□ 0.45
ATXN3P54252 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATXN3P54252 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATXN3P54252 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATXN3P54252 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.83■□□□□ 0.44
ATXN3P54252 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.83■□□□□ 0.44
ATXN3P54252 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.83■□□□□ 0.44
ATXN3P54252 RPS8P6-201ENST00000426177 609 ntBASIC17.83■□□□□ 0.44
ATXN3P54252 DNAJB3-201ENST00000446806 729 ntBASIC17.83■□□□□ 0.44
ATXN3P54252 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.83■□□□□ 0.44
ATXN3P54252 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.83■□□□□ 0.44
ATXN3P54252 AC145285.3-201ENST00000564603 959 ntBASIC17.83■□□□□ 0.44
ATXN3P54252 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 AC010327.4-202ENST00000591484 748 ntBASIC17.83■□□□□ 0.44
ATXN3P54252 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.83■□□□□ 0.44
ATXN3P54252 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATXN3P54252 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.83■□□□□ 0.44
ATXN3P54252 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATXN3P54252 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATXN3P54252 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.82■□□□□ 0.44
ATXN3P54252 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.82■□□□□ 0.44
ATXN3P54252 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.82■□□□□ 0.44
ATXN3P54252 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.82■□□□□ 0.44
ATXN3P54252 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ATXN3P54252 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 CROCCP1-201ENST00000426910 5675 ntBASIC17.82■□□□□ 0.44
ATXN3P54252 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
ATXN3P54252 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATXN3P54252 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms