Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.33■□□□□ 0.37
ZNF140P52738 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF140P52738 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.33■□□□□ 0.37
ZNF140P52738 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
ZNF140P52738 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
ZNF140P52738 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF140P52738 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF140P52738 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF140P52738 DUSP5P1-201ENST00000441325 1139 ntBASIC17.33■□□□□ 0.36
ZNF140P52738 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
ZNF140P52738 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.33■□□□□ 0.36
ZNF140P52738 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.33■□□□□ 0.36
ZNF140P52738 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 IFNL4P1-201ENST00000607083 540 ntBASIC17.33■□□□□ 0.36
ZNF140P52738 AL139288.1-201ENST00000623748 933 ntBASIC17.33■□□□□ 0.36
ZNF140P52738 AC080080.1-201ENST00000625121 2420 ntBASIC17.33■□□□□ 0.36
ZNF140P52738 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
ZNF140P52738 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
ZNF140P52738 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
ZNF140P52738 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.33■□□□□ 0.36
ZNF140P52738 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF140P52738 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
ZNF140P52738 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF140P52738 FGFR3P6-201ENST00000457012 610 ntBASIC17.32■□□□□ 0.36
ZNF140P52738 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.32■□□□□ 0.36
ZNF140P52738 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF140P52738 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF140P52738 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 MTDHP3-201ENST00000594186 672 ntBASIC17.32■□□□□ 0.36
ZNF140P52738 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.32■□□□□ 0.36
ZNF140P52738 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.32■□□□□ 0.36
ZNF140P52738 LINC02012-201ENST00000608206 1725 ntBASIC17.32■□□□□ 0.36
ZNF140P52738 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 EGFEM1P-202ENST00000431685 1563 ntBASIC17.32■□□□□ 0.36
ZNF140P52738 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
ZNF140P52738 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
ZNF140P52738 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF140P52738 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF140P52738 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF140P52738 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ZNF140P52738 ACTG1P4-201ENST00000425123 1122 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF140P52738 SAPCD2P3-201ENST00000455031 850 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 BX005266.1-201ENST00000473402 457 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.31■□□□□ 0.36
ZNF140P52738 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.31■□□□□ 0.36
ZNF140P52738 UNC93B7-201ENST00000509439 705 ntBASIC17.31■□□□□ 0.36
ZNF140P52738 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.31■□□□□ 0.36
ZNF140P52738 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms