Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
USP6P35125 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.32■■□□□ 1.32
USP6P35125 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
USP6P35125 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC23.32■■□□□ 1.32
USP6P35125 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC23.32■■□□□ 1.32
USP6P35125 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
USP6P35125 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC23.31■■□□□ 1.32
USP6P35125 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
USP6P35125 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC23.31■■□□□ 1.32
USP6P35125 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC23.31■■□□□ 1.32
USP6P35125 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC23.31■■□□□ 1.32
USP6P35125 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 CD99-202ENST00000381180 530 ntTSL 2 BASIC23.31■■□□□ 1.32
USP6P35125 HMGA1P7-201ENST00000406908 502 ntBASIC23.31■■□□□ 1.32
USP6P35125 AL671277.1-201ENST00000429656 993 ntBASIC23.31■■□□□ 1.32
USP6P35125 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
USP6P35125 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC23.31■■□□□ 1.32
USP6P35125 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC23.31■■□□□ 1.32
USP6P35125 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC23.31■■□□□ 1.32
USP6P35125 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC23.31■■□□□ 1.32
USP6P35125 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC23.31■■□□□ 1.32
USP6P35125 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
USP6P35125 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
USP6P35125 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
USP6P35125 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
USP6P35125 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC23.3■■□□□ 1.32
USP6P35125 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC23.3■■□□□ 1.32
USP6P35125 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
USP6P35125 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 TFAMP1-201ENST00000412727 736 ntBASIC23.3■■□□□ 1.32
USP6P35125 FAM58DP-201ENST00000428076 619 ntBASIC23.3■■□□□ 1.32
USP6P35125 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC23.3■■□□□ 1.32
USP6P35125 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC23.3■■□□□ 1.32
USP6P35125 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC23.3■■□□□ 1.32
USP6P35125 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC23.3■■□□□ 1.32
USP6P35125 CD7-202ENST00000578509 925 ntTSL 3 BASIC23.3■■□□□ 1.32
USP6P35125 AC005412.3-201ENST00000580309 715 ntBASIC23.3■■□□□ 1.32
USP6P35125 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
USP6P35125 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.3■■□□□ 1.32
USP6P35125 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
USP6P35125 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC23.3■■□□□ 1.32
USP6P35125 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
USP6P35125 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC23.29■■□□□ 1.32
USP6P35125 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
USP6P35125 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6P35125 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
USP6P35125 AL354751.1-201ENST00000412768 1863 ntBASIC23.29■■□□□ 1.32
USP6P35125 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 KRT18P32-201ENST00000424695 1287 ntBASIC23.29■■□□□ 1.32
USP6P35125 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
USP6P35125 AC051619.7-201ENST00000568314 623 ntBASIC23.29■■□□□ 1.32
USP6P35125 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC23.29■■□□□ 1.32
USP6P35125 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC23.29■■□□□ 1.32
USP6P35125 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6P35125 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
USP6P35125 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
USP6P35125 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC23.29■■□□□ 1.32
USP6P35125 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC23.29■■□□□ 1.32
USP6P35125 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
USP6P35125 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6P35125 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6P35125 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
USP6P35125 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP6P35125 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC23.28■■□□□ 1.32
USP6P35125 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
USP6P35125 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 TSFM-210ENST00000550559 897 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC23.28■■□□□ 1.32
USP6P35125 AL009183.1-201ENST00000603760 355 ntBASIC23.28■■□□□ 1.32
USP6P35125 AKAP8P1-201ENST00000434743 1349 ntBASIC23.28■■□□□ 1.32
USP6P35125 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC23.28■■□□□ 1.32
USP6P35125 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms