Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CIITAP33076 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CIITAP33076 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CIITAP33076 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CIITAP33076 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CIITAP33076 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.59■□□□□ 0.73
CIITAP33076 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.59■□□□□ 0.73
CIITAP33076 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.59■□□□□ 0.73
CIITAP33076 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC19.59■□□□□ 0.73
CIITAP33076 AC117500.6-201ENST00000624871 588 ntBASIC19.59■□□□□ 0.73
CIITAP33076 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC19.59■□□□□ 0.73
CIITAP33076 AL805961.1-202ENST00000641562 540 ntBASIC19.59■□□□□ 0.73
CIITAP33076 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CIITAP33076 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CIITAP33076 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CIITAP33076 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CIITAP33076 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CIITAP33076 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CIITAP33076 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CIITAP33076 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
CIITAP33076 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CIITAP33076 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.58■□□□□ 0.73
CIITAP33076 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CIITAP33076 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CIITAP33076 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CIITAP33076 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.58■□□□□ 0.73
CIITAP33076 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CIITAP33076 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CIITAP33076 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC19.58■□□□□ 0.72
CIITAP33076 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC19.58■□□□□ 0.72
CIITAP33076 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC19.58■□□□□ 0.72
CIITAP33076 AC145285.3-201ENST00000564603 959 ntBASIC19.58■□□□□ 0.72
CIITAP33076 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.58■□□□□ 0.72
CIITAP33076 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19.58■□□□□ 0.72
CIITAP33076 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 AC116353.5-201ENST00000638148 1699 ntBASIC19.58■□□□□ 0.72
CIITAP33076 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC19.58■□□□□ 0.72
CIITAP33076 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CIITAP33076 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.57■□□□□ 0.72
CIITAP33076 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC19.57■□□□□ 0.72
CIITAP33076 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC19.57■□□□□ 0.72
CIITAP33076 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.57■□□□□ 0.72
CIITAP33076 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC19.57■□□□□ 0.72
CIITAP33076 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.57■□□□□ 0.72
CIITAP33076 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC19.57■□□□□ 0.72
CIITAP33076 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 MIR1199-201ENST00000621445 119 ntBASIC19.57■□□□□ 0.72
CIITAP33076 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.57■□□□□ 0.72
CIITAP33076 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC19.57■□□□□ 0.72
CIITAP33076 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CIITAP33076 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CIITAP33076 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.57■□□□□ 0.72
CIITAP33076 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.57■□□□□ 0.72
CIITAP33076 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.57■□□□□ 0.72
CIITAP33076 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.57■□□□□ 0.72
CIITAP33076 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CIITAP33076 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.56■□□□□ 0.72
CIITAP33076 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.56■□□□□ 0.72
CIITAP33076 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CIITAP33076 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC19.56■□□□□ 0.72
CIITAP33076 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.56■□□□□ 0.72
CIITAP33076 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.56■□□□□ 0.72
CIITAP33076 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CIITAP33076 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 PTCHD3P3-201ENST00000403073 906 ntBASIC19.56■□□□□ 0.72
CIITAP33076 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC19.56■□□□□ 0.72
CIITAP33076 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CIITAP33076 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.56■□□□□ 0.72
CIITAP33076 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.56■□□□□ 0.72
CIITAP33076 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CIITAP33076 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.56■□□□□ 0.72
CIITAP33076 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.56■□□□□ 0.72
CIITAP33076 TERC-201ENST00000602385 541 ntBASIC19.56■□□□□ 0.72
CIITAP33076 AC120114.3-201ENST00000611923 658 ntBASIC19.56■□□□□ 0.72
CIITAP33076 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms