Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CHRNA3P32297 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
CHRNA3P32297 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC18.41■□□□□ 0.54
CHRNA3P32297 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CHRNA3P32297 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CHRNA3P32297 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA3P32297 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHRNA3P32297 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA3P32297 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.4■□□□□ 0.54
CHRNA3P32297 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA3P32297 LINC00265-3P-201ENST00000447588 903 ntBASIC18.4■□□□□ 0.54
CHRNA3P32297 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA3P32297 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.4■□□□□ 0.54
CHRNA3P32297 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHRNA3P32297 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.4■□□□□ 0.54
CHRNA3P32297 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.4■□□□□ 0.54
CHRNA3P32297 AC012313.10-201ENST00000623509 926 ntBASIC18.4■□□□□ 0.54
CHRNA3P32297 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CHRNA3P32297 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CHRNA3P32297 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.4■□□□□ 0.54
CHRNA3P32297 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CHRNA3P32297 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA3P32297 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
CHRNA3P32297 TNRC18P3-201ENST00000441896 2691 ntBASIC18.39■□□□□ 0.54
CHRNA3P32297 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA3P32297 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.53
CHRNA3P32297 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA3P32297 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 TOB2P1-201ENST00000469761 992 ntBASIC18.39■□□□□ 0.53
CHRNA3P32297 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.39■□□□□ 0.53
CHRNA3P32297 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 AL592071.1-201ENST00000611956 408 ntBASIC18.39■□□□□ 0.53
CHRNA3P32297 AC124864.1-201ENST00000623408 392 ntBASIC18.39■□□□□ 0.53
CHRNA3P32297 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CHRNA3P32297 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CHRNA3P32297 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
CHRNA3P32297 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA3P32297 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA3P32297 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CHRNA3P32297 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNA3P32297 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.38■□□□□ 0.53
CHRNA3P32297 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 RN7SL606P-201ENST00000472779 293 ntBASIC18.38■□□□□ 0.53
CHRNA3P32297 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 AP000867.3-201ENST00000524675 377 ntBASIC18.38■□□□□ 0.53
CHRNA3P32297 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNA3P32297 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.38■□□□□ 0.53
CHRNA3P32297 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CHRNA3P32297 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.38■□□□□ 0.53
CHRNA3P32297 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CHRNA3P32297 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms