Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CTGFP29279 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 REXO1L9P-201ENST00000604264 2108 ntBASIC19.45■□□□□ 0.7
CTGFP29279 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
CTGFP29279 AC241585.1-201ENST00000433527 519 ntBASIC19.45■□□□□ 0.7
CTGFP29279 AC022494.1-201ENST00000466044 728 ntBASIC19.45■□□□□ 0.7
CTGFP29279 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
CTGFP29279 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.45■□□□□ 0.7
CTGFP29279 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.45■□□□□ 0.7
CTGFP29279 COQ4-205ENST00000609948 956 ntTSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 AL358472.5-202ENST00000641448 1267 ntBASIC19.45■□□□□ 0.7
CTGFP29279 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTGFP29279 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
CTGFP29279 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CTGFP29279 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CTGFP29279 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.44■□□□□ 0.7
CTGFP29279 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.44■□□□□ 0.7
CTGFP29279 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CTGFP29279 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.44■□□□□ 0.7
CTGFP29279 U91328.1-201ENST00000437528 223 ntBASIC19.44■□□□□ 0.7
CTGFP29279 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.44■□□□□ 0.7
CTGFP29279 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.44■□□□□ 0.7
CTGFP29279 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.44■□□□□ 0.7
CTGFP29279 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.44■□□□□ 0.7
CTGFP29279 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.44■□□□□ 0.7
CTGFP29279 AP000842.3-202ENST00000569238 1080 ntBASIC19.44■□□□□ 0.7
CTGFP29279 MIR6752-201ENST00000618442 71 ntBASIC19.44■□□□□ 0.7
CTGFP29279 AL590560.3-201ENST00000623350 461 ntBASIC19.44■□□□□ 0.7
CTGFP29279 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTGFP29279 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.43■□□□□ 0.7
CTGFP29279 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.43■□□□□ 0.7
CTGFP29279 AC100757.3-201ENST00000622361 1406 ntBASIC19.43■□□□□ 0.7
CTGFP29279 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
CTGFP29279 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTGFP29279 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 MIR346-201ENST00000362234 95 ntBASIC19.43■□□□□ 0.7
CTGFP29279 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 ARSEP1-201ENST00000420443 635 ntBASIC19.43■□□□□ 0.7
CTGFP29279 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.43■□□□□ 0.7
CTGFP29279 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.43■□□□□ 0.7
CTGFP29279 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.43■□□□□ 0.7
CTGFP29279 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.43■□□□□ 0.7
CTGFP29279 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
CTGFP29279 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.43■□□□□ 0.7
CTGFP29279 AC027307.3-201ENST00000594262 1100 ntBASIC19.43■□□□□ 0.7
CTGFP29279 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTGFP29279 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CTGFP29279 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.42■□□□□ 0.7
CTGFP29279 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.42■□□□□ 0.7
CTGFP29279 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.42■□□□□ 0.7
CTGFP29279 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.42■□□□□ 0.7
CTGFP29279 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC19.42■□□□□ 0.7
CTGFP29279 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
CTGFP29279 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTGFP29279 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms