Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 AC003669.1-201ENST00000334569 611 ntBASIC14.74□□□□□ -0.05
COL8A2P25067 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.74□□□□□ -0.05
COL8A2P25067 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.74□□□□□ -0.05
COL8A2P25067 SIGLEC30P-201ENST00000455569 941 ntBASIC14.74□□□□□ -0.05
COL8A2P25067 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.74□□□□□ -0.05
COL8A2P25067 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 STK25P1-201ENST00000585406 838 ntBASIC14.74□□□□□ -0.05
COL8A2P25067 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.74□□□□□ -0.05
COL8A2P25067 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
COL8A2P25067 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC14.74□□□□□ -0.05
COL8A2P25067 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
COL8A2P25067 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
COL8A2P25067 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC14.73□□□□□ -0.05
COL8A2P25067 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL8A2P25067 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.73□□□□□ -0.05
COL8A2P25067 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 PMS2P1-201ENST00000431037 1228 ntBASIC14.73□□□□□ -0.05
COL8A2P25067 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
COL8A2P25067 POLD2P1-201ENST00000511220 997 ntBASIC14.73□□□□□ -0.05
COL8A2P25067 KRT18P58-201ENST00000527480 1120 ntBASIC14.73□□□□□ -0.05
COL8A2P25067 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.73□□□□□ -0.05
COL8A2P25067 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC14.73□□□□□ -0.05
COL8A2P25067 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC14.73□□□□□ -0.05
COL8A2P25067 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC14.73□□□□□ -0.05
COL8A2P25067 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
COL8A2P25067 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
COL8A2P25067 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.73□□□□□ -0.05
COL8A2P25067 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
COL8A2P25067 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.72□□□□□ -0.05
COL8A2P25067 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.72□□□□□ -0.05
COL8A2P25067 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.72□□□□□ -0.05
COL8A2P25067 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.72□□□□□ -0.05
COL8A2P25067 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.72□□□□□ -0.05
COL8A2P25067 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.72□□□□□ -0.05
COL8A2P25067 UNC93B6-202ENST00000528242 690 ntBASIC14.72□□□□□ -0.05
COL8A2P25067 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.72□□□□□ -0.05
COL8A2P25067 AC145285.3-201ENST00000564603 959 ntBASIC14.72□□□□□ -0.05
COL8A2P25067 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.72□□□□□ -0.05
COL8A2P25067 AL356488.2-201ENST00000602755 427 ntBASIC14.72□□□□□ -0.05
COL8A2P25067 AL589182.2-201ENST00000619332 1049 ntBASIC14.72□□□□□ -0.05
COL8A2P25067 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.72□□□□□ -0.05
COL8A2P25067 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC14.72□□□□□ -0.05
COL8A2P25067 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
COL8A2P25067 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
COL8A2P25067 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
COL8A2P25067 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms