Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.01■□□□□ 0.63
RFX1P22670 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.01■□□□□ 0.63
RFX1P22670 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RFX1P22670 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.01■□□□□ 0.63
RFX1P22670 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 PKD1P1-201ENST00000458669 6805 ntBASIC19■□□□□ 0.63
RFX1P22670 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19■□□□□ 0.63
RFX1P22670 PC-208ENST00000529047 1607 ntTSL 3 BASIC19■□□□□ 0.63
RFX1P22670 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC19■□□□□ 0.63
RFX1P22670 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFX1P22670 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC19■□□□□ 0.63
RFX1P22670 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19■□□□□ 0.63
RFX1P22670 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 POLD2P1-201ENST00000511220 997 ntBASIC19■□□□□ 0.63
RFX1P22670 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
RFX1P22670 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
RFX1P22670 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
RFX1P22670 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RFX1P22670 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19■□□□□ 0.63
RFX1P22670 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19■□□□□ 0.63
RFX1P22670 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19■□□□□ 0.63
RFX1P22670 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
RFX1P22670 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RFX1P22670 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19■□□□□ 0.63
RFX1P22670 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
RFX1P22670 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 MYCLP1-201ENST00000372451 1075 ntBASIC18.99■□□□□ 0.63
RFX1P22670 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 LYSMD4-203ENST00000378904 2122 ntBASIC18.99■□□□□ 0.63
RFX1P22670 BX842568.4-201ENST00000421222 227 ntBASIC18.99■□□□□ 0.63
RFX1P22670 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.99■□□□□ 0.63
RFX1P22670 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 SLC25A1P1-201ENST00000528351 927 ntBASIC18.99■□□□□ 0.63
RFX1P22670 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 AC011840.4-201ENST00000578471 627 ntBASIC18.99■□□□□ 0.63
RFX1P22670 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX1P22670 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
RFX1P22670 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
RFX1P22670 PMS2P7-201ENST00000506558 1336 ntBASIC18.99■□□□□ 0.63
RFX1P22670 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX1P22670 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
RFX1P22670 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.99■□□□□ 0.63
RFX1P22670 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 AC010460.3-201ENST00000511359 1579 ntBASIC18.98■□□□□ 0.63
RFX1P22670 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
RFX1P22670 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 LTB4R2-202ENST00000528054 3092 ntBASIC18.98■□□□□ 0.63
RFX1P22670 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFX1P22670 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
RFX1P22670 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RFX1P22670 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX1P22670 AL031284.1-201ENST00000419297 478 ntBASIC18.98■□□□□ 0.63
RFX1P22670 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX1P22670 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.98■□□□□ 0.63
RFX1P22670 AF238378.1-201ENST00000526806 358 ntBASIC18.98■□□□□ 0.63
RFX1P22670 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.98■□□□□ 0.63
RFX1P22670 AL139327.4-201ENST00000612362 153 ntBASIC18.98■□□□□ 0.63
RFX1P22670 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.98■□□□□ 0.63
RFX1P22670 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RFX1P22670 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms