Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC21.16■□□□□ 0.98
KCNA3P22001 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC21.16■□□□□ 0.98
KCNA3P22001 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC21.16■□□□□ 0.98
KCNA3P22001 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
KCNA3P22001 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC21.16■□□□□ 0.98
KCNA3P22001 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
KCNA3P22001 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNA3P22001 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNA3P22001 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 TMPRSS11CP-201ENST00000453277 683 ntBASIC21.15■□□□□ 0.98
KCNA3P22001 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNA3P22001 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
KCNA3P22001 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.15■□□□□ 0.98
KCNA3P22001 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNA3P22001 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNA3P22001 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.15■□□□□ 0.98
KCNA3P22001 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNA3P22001 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
KCNA3P22001 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNA3P22001 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNA3P22001 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC21.14■□□□□ 0.98
KCNA3P22001 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNA3P22001 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNA3P22001 AC093677.2-201ENST00000600169 1863 ntBASIC21.14■□□□□ 0.97
KCNA3P22001 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
KCNA3P22001 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
KCNA3P22001 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNA3P22001 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC21.14■□□□□ 0.97
KCNA3P22001 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC21.14■□□□□ 0.97
KCNA3P22001 AC027369.6-201ENST00000525520 931 ntBASIC21.14■□□□□ 0.97
KCNA3P22001 AP000842.3-202ENST00000569238 1080 ntBASIC21.14■□□□□ 0.97
KCNA3P22001 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNA3P22001 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
KCNA3P22001 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNA3P22001 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNA3P22001 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.14■□□□□ 0.97
KCNA3P22001 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
KCNA3P22001 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNA3P22001 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNA3P22001 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNA3P22001 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.13■□□□□ 0.97
KCNA3P22001 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC21.13■□□□□ 0.97
KCNA3P22001 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC21.13■□□□□ 0.97
KCNA3P22001 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC21.13■□□□□ 0.97
KCNA3P22001 IFT20-216ENST00000588477 774 ntTSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
KCNA3P22001 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNA3P22001 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
KCNA3P22001 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms