Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CAPN3P20807 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CAPN3P20807 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN3P20807 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN3P20807 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN3P20807 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.81■□□□□ 0.28
CAPN3P20807 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CAPN3P20807 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPN3P20807 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.81■□□□□ 0.28
CAPN3P20807 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CAPN3P20807 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CAPN3P20807 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.81■□□□□ 0.28
CAPN3P20807 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.81■□□□□ 0.28
CAPN3P20807 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CAPN3P20807 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 SLC25A1P3-201ENST00000395415 828 ntBASIC16.8■□□□□ 0.28
CAPN3P20807 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 AC112698.1-201ENST00000510299 916 ntBASIC16.8■□□□□ 0.28
CAPN3P20807 AL136038.3-201ENST00000561909 1096 ntBASIC16.8■□□□□ 0.28
CAPN3P20807 AC004263.2-201ENST00000617183 678 ntBASIC16.8■□□□□ 0.28
CAPN3P20807 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.8■□□□□ 0.28
CAPN3P20807 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 PCDH8P1-201ENST00000428983 2773 ntBASIC16.8■□□□□ 0.28
CAPN3P20807 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CAPN3P20807 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CAPN3P20807 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CAPN3P20807 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN3P20807 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN3P20807 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CAPN3P20807 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN3P20807 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.79■□□□□ 0.28
CAPN3P20807 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.79■□□□□ 0.28
CAPN3P20807 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.79■□□□□ 0.28
CAPN3P20807 GCSHP2-201ENST00000560971 527 ntBASIC16.79■□□□□ 0.28
CAPN3P20807 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 GPALPP1-207ENST00000611650 899 ntBASIC16.79■□□□□ 0.28
CAPN3P20807 AL139327.4-201ENST00000612362 153 ntBASIC16.79■□□□□ 0.28
CAPN3P20807 AC009154.2-201ENST00000621177 724 ntBASIC16.79■□□□□ 0.28
CAPN3P20807 AC079602.3-201ENST00000623931 403 ntBASIC16.79■□□□□ 0.28
CAPN3P20807 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CAPN3P20807 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms