Protein–RNA interactions for Protein: P17405

SMPD1, Sphingomyelin phosphodiesterase, humanhuman

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1P17405 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD1P17405 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD1P17405 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.27■□□□□ 0.68
SMPD1P17405 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.27■□□□□ 0.68
SMPD1P17405 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.27■□□□□ 0.68
SMPD1P17405 AC107918.2-201ENST00000530817 355 ntBASIC19.27■□□□□ 0.68
SMPD1P17405 AC092364.2-202ENST00000597012 1073 ntBASIC19.27■□□□□ 0.68
SMPD1P17405 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
SMPD1P17405 AC093512.1-201ENST00000617969 520 ntBASIC19.27■□□□□ 0.68
SMPD1P17405 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SMPD1P17405 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
SMPD1P17405 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMPD1P17405 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMPD1P17405 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMPD1P17405 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.27■□□□□ 0.67
SMPD1P17405 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SMPD1P17405 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.26■□□□□ 0.67
SMPD1P17405 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.26■□□□□ 0.67
SMPD1P17405 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SMPD1P17405 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMPD1P17405 ABALON-201ENST00000629058 1903 ntBASIC19.26■□□□□ 0.67
SMPD1P17405 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC19.26■□□□□ 0.67
SMPD1P17405 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC19.26■□□□□ 0.67
SMPD1P17405 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.26■□□□□ 0.67
SMPD1P17405 AC023141.5-201ENST00000458585 616 ntBASIC19.26■□□□□ 0.67
SMPD1P17405 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.26■□□□□ 0.67
SMPD1P17405 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
SMPD1P17405 AC093520.2-201ENST00000561830 333 ntBASIC19.26■□□□□ 0.67
SMPD1P17405 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC19.26■□□□□ 0.67
SMPD1P17405 AC099522.2-201ENST00000607001 744 ntBASIC19.26■□□□□ 0.67
SMPD1P17405 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.26■□□□□ 0.67
SMPD1P17405 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.26■□□□□ 0.67
SMPD1P17405 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMPD1P17405 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SMPD1P17405 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
SMPD1P17405 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.25■□□□□ 0.67
SMPD1P17405 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMPD1P17405 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMPD1P17405 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
SMPD1P17405 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 AC002056.1-201ENST00000395613 760 ntBASIC19.25■□□□□ 0.67
SMPD1P17405 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.25■□□□□ 0.67
SMPD1P17405 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.25■□□□□ 0.67
SMPD1P17405 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.25■□□□□ 0.67
SMPD1P17405 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC19.25■□□□□ 0.67
SMPD1P17405 LSM12-202ENST00000585388 942 ntTSL 3 BASIC19.25■□□□□ 0.67
SMPD1P17405 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC19.25■□□□□ 0.67
SMPD1P17405 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.25■□□□□ 0.67
SMPD1P17405 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
SMPD1P17405 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMPD1P17405 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.25■□□□□ 0.67
SMPD1P17405 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
SMPD1P17405 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMPD1P17405 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.24■□□□□ 0.67
SMPD1P17405 LINC00304-203ENST00000565008 1864 ntBASIC19.24■□□□□ 0.67
SMPD1P17405 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 HARS-203ENST00000431330 1774 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC19.24■□□□□ 0.67
SMPD1P17405 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMPD1P17405 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.24■□□□□ 0.67
SMPD1P17405 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 AL355306.1-201ENST00000415580 579 ntBASIC19.24■□□□□ 0.67
SMPD1P17405 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMPD1P17405 TIMM8BP1-201ENST00000452384 211 ntBASIC19.24■□□□□ 0.67
SMPD1P17405 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMPD1P17405 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SMPD1P17405 SPCS2P1-201ENST00000561636 679 ntBASIC19.24■□□□□ 0.67
SMPD1P17405 AC011467.4-201ENST00000594891 528 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms