Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.19■□□□□ 0.5
TCF4P15884 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCF4P15884 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
TCF4P15884 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCF4P15884 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TCF4P15884 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
TCF4P15884 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TCF4P15884 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.18■□□□□ 0.5
TCF4P15884 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.18■□□□□ 0.5
TCF4P15884 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.18■□□□□ 0.5
TCF4P15884 AC093525.9-201ENST00000624961 1746 ntBASIC18.18■□□□□ 0.5
TCF4P15884 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
TCF4P15884 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.18■□□□□ 0.5
TCF4P15884 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.18■□□□□ 0.5
TCF4P15884 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
TCF4P15884 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.18■□□□□ 0.5
TCF4P15884 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.18■□□□□ 0.5
TCF4P15884 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.18■□□□□ 0.5
TCF4P15884 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TCF4P15884 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TCF4P15884 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
TCF4P15884 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.17■□□□□ 0.5
TCF4P15884 AC106886.4-201ENST00000623557 2502 ntBASIC18.17■□□□□ 0.5
TCF4P15884 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 MYCLP1-201ENST00000372451 1075 ntBASIC18.17■□□□□ 0.5
TCF4P15884 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TCF4P15884 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
TCF4P15884 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.17■□□□□ 0.5
TCF4P15884 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
TCF4P15884 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.17■□□□□ 0.5
TCF4P15884 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.17■□□□□ 0.5
TCF4P15884 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TCF4P15884 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
TCF4P15884 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TCF4P15884 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.16■□□□□ 0.5
TCF4P15884 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TCF4P15884 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
TCF4P15884 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 AC084018.2-201ENST00000613093 2607 ntBASIC18.16■□□□□ 0.5
TCF4P15884 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
TCF4P15884 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.16■□□□□ 0.5
TCF4P15884 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.16■□□□□ 0.5
TCF4P15884 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.16■□□□□ 0.5
TCF4P15884 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.16■□□□□ 0.5
TCF4P15884 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.16■□□□□ 0.5
TCF4P15884 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC18.16■□□□□ 0.5
TCF4P15884 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TCF4P15884 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms