Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.25■□□□□ 0.35
COL6A2P12110 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
COL6A2P12110 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.25■□□□□ 0.35
COL6A2P12110 AC103564.2-201ENST00000432853 1299 ntBASIC17.25■□□□□ 0.35
COL6A2P12110 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
COL6A2P12110 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.25■□□□□ 0.35
COL6A2P12110 GUSBP12-201ENST00000513727 720 ntBASIC17.25■□□□□ 0.35
COL6A2P12110 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 AC124947.2-201ENST00000547118 1133 ntBASIC17.25■□□□□ 0.35
COL6A2P12110 AC109462.3-201ENST00000573934 613 ntBASIC17.25■□□□□ 0.35
COL6A2P12110 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
COL6A2P12110 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.25■□□□□ 0.35
COL6A2P12110 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
COL6A2P12110 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
COL6A2P12110 AL596257.1-201ENST00000641463 2694 ntBASIC17.24■□□□□ 0.35
COL6A2P12110 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
COL6A2P12110 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC17.24■□□□□ 0.35
COL6A2P12110 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL6A2P12110 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
COL6A2P12110 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
COL6A2P12110 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.24■□□□□ 0.35
COL6A2P12110 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.24■□□□□ 0.35
COL6A2P12110 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 AL353801.3-201ENST00000609898 542 ntBASIC17.24■□□□□ 0.35
COL6A2P12110 AC073912.3-201ENST00000624414 853 ntBASIC17.24■□□□□ 0.35
COL6A2P12110 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.24■□□□□ 0.35
COL6A2P12110 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.24■□□□□ 0.35
COL6A2P12110 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 AL162727.3-201ENST00000635661 2787 ntBASIC17.24■□□□□ 0.35
COL6A2P12110 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
COL6A2P12110 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.24■□□□□ 0.35
COL6A2P12110 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
COL6A2P12110 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 AC125634.1-201ENST00000438758 1403 ntBASIC17.23■□□□□ 0.35
COL6A2P12110 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.23■□□□□ 0.35
COL6A2P12110 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.23■□□□□ 0.35
COL6A2P12110 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
COL6A2P12110 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 AC005521.1-201ENST00000393351 872 ntBASIC17.23■□□□□ 0.35
COL6A2P12110 AK4P3-201ENST00000418260 669 ntBASIC17.23■□□□□ 0.35
COL6A2P12110 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.23■□□□□ 0.35
COL6A2P12110 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.23■□□□□ 0.35
COL6A2P12110 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.23■□□□□ 0.35
COL6A2P12110 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.23■□□□□ 0.35
COL6A2P12110 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
COL6A2P12110 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
COL6A2P12110 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
COL6A2P12110 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
COL6A2P12110 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms