Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC6P09630 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.58■□□□□ 0.72
HOXC6P09630 SLC25A6P2-201ENST00000497974 877 ntBASIC19.58■□□□□ 0.72
HOXC6P09630 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.58■□□□□ 0.72
HOXC6P09630 DUT-210ENST00000559935 569 ntTSL 3 BASIC19.58■□□□□ 0.72
HOXC6P09630 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.58■□□□□ 0.72
HOXC6P09630 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.58■□□□□ 0.72
HOXC6P09630 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.58■□□□□ 0.72
HOXC6P09630 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC6P09630 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC6P09630 AC026120.1-201ENST00000611536 926 ntBASIC19.58■□□□□ 0.72
HOXC6P09630 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC6P09630 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HOXC6P09630 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.58■□□□□ 0.72
HOXC6P09630 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC6P09630 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC6P09630 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
HOXC6P09630 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HOXC6P09630 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
HOXC6P09630 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.58■□□□□ 0.72
HOXC6P09630 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.58■□□□□ 0.72
HOXC6P09630 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
HOXC6P09630 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
HOXC6P09630 BICD1-207ENST00000551848 1962 ntBASIC19.57■□□□□ 0.72
HOXC6P09630 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
HOXC6P09630 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC6P09630 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC6P09630 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 AL135999.2-201ENST00000622438 1686 ntBASIC19.57■□□□□ 0.72
HOXC6P09630 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 AL355306.1-201ENST00000415580 579 ntBASIC19.57■□□□□ 0.72
HOXC6P09630 FAM86GP-201ENST00000448322 971 ntBASIC19.57■□□□□ 0.72
HOXC6P09630 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC6P09630 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 FAM86C2P-203ENST00000528684 1004 ntBASIC19.57■□□□□ 0.72
HOXC6P09630 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.57■□□□□ 0.72
HOXC6P09630 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.57■□□□□ 0.72
HOXC6P09630 AC099522.2-201ENST00000607001 744 ntBASIC19.57■□□□□ 0.72
HOXC6P09630 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC6P09630 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC6P09630 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC6P09630 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC6P09630 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
HOXC6P09630 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.57■□□□□ 0.72
HOXC6P09630 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 KRT18P55-202ENST00000578578 1546 ntBASIC19.56■□□□□ 0.72
HOXC6P09630 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
HOXC6P09630 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXC6P09630 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC19.56■□□□□ 0.72
HOXC6P09630 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HOXC6P09630 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
HOXC6P09630 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXC6P09630 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HOXC6P09630 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXC6P09630 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
HOXC6P09630 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.56■□□□□ 0.72
HOXC6P09630 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
HOXC6P09630 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
HOXC6P09630 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC6P09630 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
HOXC6P09630 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXC6P09630 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 66.7 ms