Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC19.19■□□□□ 0.66
CD4P01730 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC19.19■□□□□ 0.66
CD4P01730 AC005498.2-205ENST00000593218 784 ntBASIC19.19■□□□□ 0.66
CD4P01730 AC239800.4-201ENST00000603712 296 ntBASIC19.19■□□□□ 0.66
CD4P01730 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC19.19■□□□□ 0.66
CD4P01730 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CD4P01730 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.19■□□□□ 0.66
CD4P01730 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CD4P01730 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CD4P01730 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 ABALON-201ENST00000629058 1903 ntBASIC19.18■□□□□ 0.66
CD4P01730 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 PTMS-202ENST00000389462 773 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC19.18■□□□□ 0.66
CD4P01730 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.18■□□□□ 0.66
CD4P01730 AC025678.2-201ENST00000562061 970 ntBASIC19.18■□□□□ 0.66
CD4P01730 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.18■□□□□ 0.66
CD4P01730 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC19.18■□□□□ 0.66
CD4P01730 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CD4P01730 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.18■□□□□ 0.66
CD4P01730 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.18■□□□□ 0.66
CD4P01730 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CD4P01730 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.17■□□□□ 0.66
CD4P01730 PI4KAP1-204ENST00000612579 1703 ntBASIC19.17■□□□□ 0.66
CD4P01730 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.17■□□□□ 0.66
CD4P01730 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 DDX43P3-201ENST00000441064 443 ntBASIC19.17■□□□□ 0.66
CD4P01730 AC023141.5-201ENST00000458585 616 ntBASIC19.17■□□□□ 0.66
CD4P01730 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.17■□□□□ 0.66
CD4P01730 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.17■□□□□ 0.66
CD4P01730 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.17■□□□□ 0.66
CD4P01730 INO80C-206ENST00000586489 594 ntTSL 3 BASIC19.17■□□□□ 0.66
CD4P01730 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.17■□□□□ 0.66
CD4P01730 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD4P01730 AL590787.1-201ENST00000568856 1315 ntBASIC19.17■□□□□ 0.66
CD4P01730 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CD4P01730 AC100803.2-201ENST00000562459 1963 ntBASIC19.17■□□□□ 0.66
CD4P01730 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.17■□□□□ 0.66
CD4P01730 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CD4P01730 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.17■□□□□ 0.66
CD4P01730 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CD4P01730 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CD4P01730 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.16■□□□□ 0.66
CD4P01730 AC138932.1-201ENST00000534164 6830 ntBASIC19.16■□□□□ 0.66
CD4P01730 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CD4P01730 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 AP000997.3-201ENST00000623333 2250 ntBASIC19.16■□□□□ 0.66
CD4P01730 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CD4P01730 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.16■□□□□ 0.66
CD4P01730 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CD4P01730 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC19.16■□□□□ 0.66
CD4P01730 ADH5P3-201ENST00000433842 1137 ntBASIC19.16■□□□□ 0.66
CD4P01730 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.16■□□□□ 0.66
CD4P01730 FAM185BP-201ENST00000443595 716 ntBASIC19.16■□□□□ 0.66
CD4P01730 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC19.16■□□□□ 0.66
CD4P01730 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
CD4P01730 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
CD4P01730 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC19.16■□□□□ 0.66
CD4P01730 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms