Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.68■□□□□ 0.42
USP1O94782 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
USP1O94782 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.68■□□□□ 0.42
USP1O94782 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.68■□□□□ 0.42
USP1O94782 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
USP1O94782 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
USP1O94782 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.68■□□□□ 0.42
USP1O94782 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
USP1O94782 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC17.68■□□□□ 0.42
USP1O94782 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.68■□□□□ 0.42
USP1O94782 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
USP1O94782 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
USP1O94782 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 AC116353.5-201ENST00000638148 1699 ntBASIC17.67■□□□□ 0.42
USP1O94782 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.67■□□□□ 0.42
USP1O94782 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
USP1O94782 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
USP1O94782 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.67■□□□□ 0.42
USP1O94782 RN7SL606P-201ENST00000472779 293 ntBASIC17.67■□□□□ 0.42
USP1O94782 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.67■□□□□ 0.42
USP1O94782 AL353801.3-201ENST00000609898 542 ntBASIC17.67■□□□□ 0.42
USP1O94782 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.67■□□□□ 0.42
USP1O94782 AL118508.1-201ENST00000613502 2345 ntBASIC17.67■□□□□ 0.42
USP1O94782 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
USP1O94782 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.67■□□□□ 0.42
USP1O94782 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.67■□□□□ 0.42
USP1O94782 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 CICP6-201ENST00000457191 2729 ntBASIC17.67■□□□□ 0.42
USP1O94782 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.67■□□□□ 0.42
USP1O94782 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
USP1O94782 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.67■□□□□ 0.42
USP1O94782 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
USP1O94782 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 AC011270.2-201ENST00000624293 2550 ntBASIC17.66■□□□□ 0.42
USP1O94782 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.66■□□□□ 0.42
USP1O94782 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.66■□□□□ 0.42
USP1O94782 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
USP1O94782 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
USP1O94782 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.66■□□□□ 0.42
USP1O94782 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
USP1O94782 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
USP1O94782 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms