Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.35■□□□□ 0.21
CTNSO60931 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.35■□□□□ 0.21
CTNSO60931 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.35■□□□□ 0.21
CTNSO60931 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 BX005266.1-201ENST00000473402 457 ntBASIC16.35■□□□□ 0.21
CTNSO60931 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.35■□□□□ 0.21
CTNSO60931 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 AL160237.2-201ENST00000556165 472 ntBASIC16.35■□□□□ 0.21
CTNSO60931 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.35■□□□□ 0.21
CTNSO60931 AC104692.2-201ENST00000603054 253 ntBASIC16.35■□□□□ 0.21
CTNSO60931 AL031008.1-201ENST00000619963 541 ntBASIC16.35■□□□□ 0.21
CTNSO60931 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CTNSO60931 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CTNSO60931 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.35■□□□□ 0.21
CTNSO60931 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.35■□□□□ 0.21
CTNSO60931 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CTNSO60931 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
CTNSO60931 AC004817.3-201ENST00000602957 2129 ntBASIC16.34■□□□□ 0.21
CTNSO60931 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
CTNSO60931 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
CTNSO60931 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 AC079781.3-201ENST00000449110 356 ntBASIC16.34■□□□□ 0.21
CTNSO60931 FAM197Y8-203ENST00000450145 560 ntBASIC16.34■□□□□ 0.21
CTNSO60931 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.34■□□□□ 0.21
CTNSO60931 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.34■□□□□ 0.21
CTNSO60931 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.34■□□□□ 0.21
CTNSO60931 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.34■□□□□ 0.21
CTNSO60931 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
CTNSO60931 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.34■□□□□ 0.21
CTNSO60931 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CTNSO60931 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.34■□□□□ 0.21
CTNSO60931 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.33■□□□□ 0.21
CTNSO60931 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.33■□□□□ 0.21
CTNSO60931 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTNSO60931 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTNSO60931 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CTNSO60931 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC16.33■□□□□ 0.21
CTNSO60931 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CTNSO60931 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CTNSO60931 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNSO60931 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CTNSO60931 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CTNSO60931 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.33■□□□□ 0.2
CTNSO60931 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.33■□□□□ 0.2
CTNSO60931 AC021087.4-201ENST00000563761 564 ntBASIC16.33■□□□□ 0.2
CTNSO60931 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.33■□□□□ 0.2
CTNSO60931 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CTNSO60931 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.33■□□□□ 0.2
CTNSO60931 MTDHP4-201ENST00000600287 670 ntBASIC16.33■□□□□ 0.2
CTNSO60931 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CTNSO60931 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CTNSO60931 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CTNSO60931 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CTNSO60931 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms