Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CTNND1O60716 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
CTNND1O60716 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTNND1O60716 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNND1O60716 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC20.28■□□□□ 0.84
CTNND1O60716 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
CTNND1O60716 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.28■□□□□ 0.84
CTNND1O60716 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CTNND1O60716 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC20.28■□□□□ 0.84
CTNND1O60716 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.28■□□□□ 0.84
CTNND1O60716 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.28■□□□□ 0.84
CTNND1O60716 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CTNND1O60716 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CTNND1O60716 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.27■□□□□ 0.84
CTNND1O60716 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CTNND1O60716 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 REXO1L11P-201ENST00000620964 1927 ntBASIC20.27■□□□□ 0.84
CTNND1O60716 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.27■□□□□ 0.84
CTNND1O60716 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
CTNND1O60716 TSEN15P1-201ENST00000423257 515 ntBASIC20.27■□□□□ 0.84
CTNND1O60716 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 RNF34-208ENST00000555076 593 ntTSL 3 BASIC20.27■□□□□ 0.84
CTNND1O60716 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.27■□□□□ 0.84
CTNND1O60716 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC20.27■□□□□ 0.84
CTNND1O60716 AC004835.2-201ENST00000603762 682 ntBASIC20.27■□□□□ 0.84
CTNND1O60716 ACTL9-202ENST00000612068 1252 ntBASIC20.27■□□□□ 0.84
CTNND1O60716 REXO1L3P-201ENST00000622202 1288 ntBASIC20.27■□□□□ 0.84
CTNND1O60716 AC105339.1-204ENST00000636249 355 ntBASIC20.27■□□□□ 0.84
CTNND1O60716 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.27■□□□□ 0.84
CTNND1O60716 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CTNND1O60716 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CTNND1O60716 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.27■□□□□ 0.84
CTNND1O60716 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNND1O60716 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNND1O60716 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CTNND1O60716 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.27■□□□□ 0.83
CTNND1O60716 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CTNND1O60716 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNND1O60716 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNND1O60716 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.26■□□□□ 0.83
CTNND1O60716 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 AC090164.3-201ENST00000610780 2143 ntBASIC20.26■□□□□ 0.83
CTNND1O60716 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNND1O60716 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.26■□□□□ 0.83
CTNND1O60716 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CTNND1O60716 AL513480.1-201ENST00000451731 511 ntBASIC20.26■□□□□ 0.83
CTNND1O60716 MIR3197-201ENST00000582241 73 ntBASIC20.26■□□□□ 0.83
CTNND1O60716 AL121761.2-201ENST00000598007 1648 ntBASIC20.26■□□□□ 0.83
CTNND1O60716 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CTNND1O60716 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC20.25■□□□□ 0.83
CTNND1O60716 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CTNND1O60716 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 AC020763.4-201ENST00000623414 4170 ntBASIC20.25■□□□□ 0.83
CTNND1O60716 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CTNND1O60716 AL139400.1-201ENST00000366220 510 ntBASIC20.25■□□□□ 0.83
CTNND1O60716 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC20.25■□□□□ 0.83
CTNND1O60716 AC004461.1-201ENST00000412461 403 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms