Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
TSPAN3O60637 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
TSPAN3O60637 AC008764.6-201ENST00000595909 2069 ntBASIC17.99■□□□□ 0.47
TSPAN3O60637 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 AL355312.1-201ENST00000407115 2176 ntBASIC17.98■□□□□ 0.47
TSPAN3O60637 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
TSPAN3O60637 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 MYCLP1-201ENST00000372451 1075 ntBASIC17.98■□□□□ 0.47
TSPAN3O60637 MIR940-201ENST00000401276 94 ntBASIC17.98■□□□□ 0.47
TSPAN3O60637 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.98■□□□□ 0.47
TSPAN3O60637 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.98■□□□□ 0.47
TSPAN3O60637 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.98■□□□□ 0.47
TSPAN3O60637 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC17.98■□□□□ 0.47
TSPAN3O60637 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TSPAN3O60637 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 AC097637.2-201ENST00000624096 1997 ntBASIC17.98■□□□□ 0.47
TSPAN3O60637 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
TSPAN3O60637 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
TSPAN3O60637 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TSPAN3O60637 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.97■□□□□ 0.47
TSPAN3O60637 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
TSPAN3O60637 IGHV3-22-201ENST00000520721 359 ntBASIC17.97■□□□□ 0.47
TSPAN3O60637 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.97■□□□□ 0.47
TSPAN3O60637 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 AC104109.2-201ENST00000602919 1418 ntBASIC17.97■□□□□ 0.47
TSPAN3O60637 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TSPAN3O60637 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TSPAN3O60637 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.96■□□□□ 0.47
TSPAN3O60637 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TSPAN3O60637 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.96■□□□□ 0.47
TSPAN3O60637 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 MIR574-201ENST00000385209 96 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.96■□□□□ 0.47
TSPAN3O60637 RNA5SP415-201ENST00000517246 115 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.96■□□□□ 0.47
TSPAN3O60637 AC106730.1-201ENST00000566722 1090 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.96■□□□□ 0.47
TSPAN3O60637 AL356488.2-201ENST00000602755 427 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 GPALPP1-207ENST00000611650 899 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 AL589182.2-201ENST00000619332 1049 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 AC117500.6-201ENST00000624871 588 ntBASIC17.96■□□□□ 0.47
TSPAN3O60637 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.96■□□□□ 0.47
TSPAN3O60637 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TSPAN3O60637 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TSPAN3O60637 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms