Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.92■□□□□ 0.14
RNF13O43567 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.92■□□□□ 0.14
RNF13O43567 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF13O43567 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
RNF13O43567 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
RNF13O43567 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
RNF13O43567 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.91■□□□□ 0.14
RNF13O43567 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC15.91■□□□□ 0.14
RNF13O43567 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF13O43567 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF13O43567 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.91■□□□□ 0.14
RNF13O43567 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.91■□□□□ 0.14
RNF13O43567 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RNF13O43567 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC15.91■□□□□ 0.14
RNF13O43567 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RNF13O43567 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
RNF13O43567 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF13O43567 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 TBC1D3P5-201ENST00000579401 1545 ntBASIC15.9■□□□□ 0.14
RNF13O43567 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RNF13O43567 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF13O43567 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
RNF13O43567 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF13O43567 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF13O43567 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 AL136038.3-201ENST00000561909 1096 ntBASIC15.9■□□□□ 0.14
RNF13O43567 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
RNF13O43567 AC011498.5-201ENST00000592027 486 ntBASIC15.9■□□□□ 0.14
RNF13O43567 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.9■□□□□ 0.14
RNF13O43567 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
RNF13O43567 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF13O43567 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.9■□□□□ 0.14
RNF13O43567 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RNF13O43567 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RNF13O43567 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF13O43567 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF13O43567 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
RNF13O43567 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF13O43567 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC15.89■□□□□ 0.13
RNF13O43567 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RNF13O43567 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms