Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTSS1O43312 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.83■□□□□ 0.45
MTSS1O43312 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MTSS1O43312 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTSS1O43312 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
MTSS1O43312 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTSS1O43312 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
MTSS1O43312 AP001094.4-201ENST00000579008 2176 ntBASIC17.83■□□□□ 0.45
MTSS1O43312 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
MTSS1O43312 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
MTSS1O43312 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.83■□□□□ 0.45
MTSS1O43312 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.83■□□□□ 0.44
MTSS1O43312 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.83■□□□□ 0.44
MTSS1O43312 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.83■□□□□ 0.44
MTSS1O43312 STK19B-204ENST00000512515 211 ntBASIC17.83■□□□□ 0.44
MTSS1O43312 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.83■□□□□ 0.44
MTSS1O43312 AP000867.3-201ENST00000524675 377 ntBASIC17.83■□□□□ 0.44
MTSS1O43312 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.83■□□□□ 0.44
MTSS1O43312 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.83■□□□□ 0.44
MTSS1O43312 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.83■□□□□ 0.44
MTSS1O43312 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
MTSS1O43312 AC009336.1-201ENST00000608941 1553 ntBASIC17.83■□□□□ 0.44
MTSS1O43312 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.83■□□□□ 0.44
MTSS1O43312 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
MTSS1O43312 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.82■□□□□ 0.44
MTSS1O43312 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.82■□□□□ 0.44
MTSS1O43312 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.82■□□□□ 0.44
MTSS1O43312 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.82■□□□□ 0.44
MTSS1O43312 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.82■□□□□ 0.44
MTSS1O43312 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.82■□□□□ 0.44
MTSS1O43312 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.82■□□□□ 0.44
MTSS1O43312 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
MTSS1O43312 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
MTSS1O43312 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
MTSS1O43312 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
MTSS1O43312 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 RCN1P2-201ENST00000398357 915 ntBASIC17.81■□□□□ 0.44
MTSS1O43312 KLF4P1-201ENST00000412782 1185 ntBASIC17.81■□□□□ 0.44
MTSS1O43312 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
MTSS1O43312 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.81■□□□□ 0.44
MTSS1O43312 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
MTSS1O43312 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
MTSS1O43312 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTSS1O43312 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.8■□□□□ 0.44
MTSS1O43312 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
MTSS1O43312 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
MTSS1O43312 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms