Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
UBFD1O14562 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
UBFD1O14562 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBFD1O14562 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 MYCLP1-201ENST00000372451 1075 ntBASIC16.93■□□□□ 0.3
UBFD1O14562 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBFD1O14562 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC16.93■□□□□ 0.3
UBFD1O14562 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.93■□□□□ 0.3
UBFD1O14562 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.93■□□□□ 0.3
UBFD1O14562 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
UBFD1O14562 AL138831.2-201ENST00000606564 490 ntBASIC16.93■□□□□ 0.3
UBFD1O14562 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.93■□□□□ 0.3
UBFD1O14562 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.93■□□□□ 0.3
UBFD1O14562 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
UBFD1O14562 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
UBFD1O14562 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 BCL2-203ENST00000589955 5011 ntBASIC16.93■□□□□ 0.3
UBFD1O14562 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.93■□□□□ 0.3
UBFD1O14562 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.93■□□□□ 0.3
UBFD1O14562 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
UBFD1O14562 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 AC018695.7-201ENST00000624587 2492 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 AC078925.2-201ENST00000624013 1973 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.92■□□□□ 0.3
UBFD1O14562 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 AL645929.1-201ENST00000420084 975 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 TSPY22P-201ENST00000427496 604 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 FAM210CP-201ENST00000445714 574 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.92■□□□□ 0.3
UBFD1O14562 IGHV3-52-201ENST00000519770 353 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.92■□□□□ 0.3
UBFD1O14562 AL592071.1-201ENST00000611956 408 ntBASIC16.92■□□□□ 0.3
UBFD1O14562 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
UBFD1O14562 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.92■□□□□ 0.3
UBFD1O14562 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
UBFD1O14562 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.92■□□□□ 0.3
UBFD1O14562 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.91■□□□□ 0.3
UBFD1O14562 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.91■□□□□ 0.3
UBFD1O14562 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 KRT8P10-201ENST00000450021 1447 ntBASIC16.91■□□□□ 0.3
UBFD1O14562 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
UBFD1O14562 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
UBFD1O14562 AL671277.2-201ENST00000458060 996 ntBASIC16.91■□□□□ 0.3
UBFD1O14562 GUSBP12-201ENST00000513727 720 ntBASIC16.91■□□□□ 0.3
UBFD1O14562 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.91■□□□□ 0.3
UBFD1O14562 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.91■□□□□ 0.3
UBFD1O14562 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.91■□□□□ 0.3
UBFD1O14562 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.91■□□□□ 0.3
UBFD1O14562 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
UBFD1O14562 AC124864.1-201ENST00000623408 392 ntBASIC16.91■□□□□ 0.3
UBFD1O14562 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
UBFD1O14562 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.91■□□□□ 0.3
UBFD1O14562 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.91■□□□□ 0.3
UBFD1O14562 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
UBFD1O14562 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.91■□□□□ 0.3
UBFD1O14562 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms