Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN4O14493 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN4O14493 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CLDN4O14493 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC16.45■□□□□ 0.22
CLDN4O14493 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 AF238378.1-201ENST00000526806 358 ntBASIC16.45■□□□□ 0.22
CLDN4O14493 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN4O14493 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC16.45■□□□□ 0.22
CLDN4O14493 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN4O14493 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN4O14493 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.45■□□□□ 0.22
CLDN4O14493 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.45■□□□□ 0.22
CLDN4O14493 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 AC079776.2-201ENST00000641154 1609 ntBASIC16.45■□□□□ 0.22
CLDN4O14493 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.45■□□□□ 0.22
CLDN4O14493 SIGLEC16-201ENST00000599858 1437 ntBASIC16.45■□□□□ 0.22
CLDN4O14493 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CLDN4O14493 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN4O14493 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 AC009336.1-201ENST00000608941 1553 ntBASIC16.44■□□□□ 0.22
CLDN4O14493 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 AC067852.2-201ENST00000590513 2313 ntBASIC16.44■□□□□ 0.22
CLDN4O14493 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CLDN4O14493 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.44■□□□□ 0.22
CLDN4O14493 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN4O14493 SPDYE21P-201ENST00000413323 827 ntBASIC16.44■□□□□ 0.22
CLDN4O14493 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 AL121912.1-201ENST00000603683 238 ntBASIC16.44■□□□□ 0.22
CLDN4O14493 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN4O14493 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN4O14493 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.44■□□□□ 0.22
CLDN4O14493 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.44■□□□□ 0.22
CLDN4O14493 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CLDN4O14493 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN4O14493 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.43■□□□□ 0.22
CLDN4O14493 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN4O14493 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN4O14493 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN4O14493 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN4O14493 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
CLDN4O14493 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CLDN4O14493 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN4O14493 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN4O14493 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN4O14493 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN4O14493 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN4O14493 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN4O14493 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms